Gb_13072

Description : component RPL37a of LSU proteome component

Gene families : OG0003192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003192_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_13072
Cluster	HCCA: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00151080	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AMTR_s00092p00089090	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT3G60245	No alias	Zinc-binding ribosomal protein family protein	0.21	OrthoFinder output from all 47 species
Adi_g039360	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ala_g10789	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Azfi_s0083.g038895	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.12	OrthoFinder output from all 47 species
Cba_g49975	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cba_g77659	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.22G064400.1	Ceric.22G064400	component *(eL43) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Ceric.28G044800.1	Ceric.28G044800	component *(eL43) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.64	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.16	OrthoFinder output from all 47 species
Cre06.g257150	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.23	OrthoFinder output from all 47 species
Dac_g40944	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Ehy_g20175	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
GSVIVT01013278001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.15	OrthoFinder output from all 47 species
GSVIVT01018328001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.2	OrthoFinder output from all 47 species
Gb_12624	No alias	component RPL37a of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os01g48770.2	LOC_Os01g48770	component RPL37a of LSU proteome component	0.07	OrthoFinder output from all 47 species
LOC_Os05g48320.1	LOC_Os05g48320	component RPL37a of LSU proteome component	0.14	OrthoFinder output from all 47 species
Lfl_g19853	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
MA_158457g0010	No alias	component RPL37a of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_4732g0010	No alias	component RPL37a of LSU proteome component	0.05	OrthoFinder output from all 47 species
Mp5g08340.1	No alias	component RPL37a of LSU proteome component	0.05	OrthoFinder output from all 47 species
Mp5g09590.1	No alias	component RPL37a of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp6g07870.1	No alias	component RPL37a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Msp_g39472	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Pir_g28779	No alias	component *(eL43) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c11_2550V3.1	Pp3c11_2550	Zinc-binding ribosomal protein family protein	0.18	OrthoFinder output from all 47 species
Pp3c2_34770V3.1	Pp3c2_34770	Zinc-binding ribosomal protein family protein	0.1	OrthoFinder output from all 47 species
Pp3c3_1620V3.1	Pp3c3_1620	Zinc-binding ribosomal protein family protein	0.07	OrthoFinder output from all 47 species
Pp3c7_21150V3.1	Pp3c7_21150	Zinc-binding ribosomal protein family protein	0.19	OrthoFinder output from all 47 species
Sam_g23324	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Smo227221	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	OrthoFinder output from all 47 species
Solyc08g007140.4.1	Solyc08g007140	component RPL37a of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc08g077710.3.1	Solyc08g077710	component RPL37a of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc08g077720.3.1	Solyc08g077720	component RPL37a of LSU proteome component	0.13	OrthoFinder output from all 47 species
Zm00001e008395_P001	Zm00001e008395	component RPL37a of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e013684_P001	Zm00001e013684	component RPL37a of LSU proteome component	0.15	OrthoFinder output from all 47 species
Zm00001e025201_P002	Zm00001e025201	component RPL37a of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e026482_P001	Zm00001e026482	component RPL37a of LSU proteome component	0.17	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002674	Ribosomal_L37ae	4	88

External Links

No external refs found!

Gb_13072

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation