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  5. Gb_12857

Gb_12857 (RD21, RD21A)


Aliases : RD21, RD21A

Description : Cysteine proteinase RD21A OS=Arabidopsis thaliana (sp|p43297|rd21a_arath : 582.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 345.6)


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12857
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00166050 XCP1,... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
AMTR_s00051p00208220 RD21, RD21A,... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00214890 SAG12,... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00215070 SAG12,... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00215230 SAG12,... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00215400 SAG12,... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00215530 SAG12,... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00215790 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 OrthoFinder output from all 47 species
AT1G06260 No alias Cysteine proteinases superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.06 OrthoFinder output from all 47 species
AT3G48340 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G45890 SAG12 senescence-associated gene 12 0.03 OrthoFinder output from all 47 species
AT5G50260 No alias Cysteine proteinases superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g024466 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Adi_g106965 CP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aev_g00916 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aev_g04559 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aev_g09797 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aev_g17587 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ala_g14988 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Als_g11954 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Als_g11955 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Als_g52778 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.29G055400.1 Ceric.29G055400 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.39G014000.1 XCP2, Ceric.39G014000 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.39G014200.1 XCP2, Ceric.39G014200 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Cre09.g407700 RD21, RD21A Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g36098 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dde_g23863 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ehy_g10453 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000582001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os01g73980.1 XCP2, LOC_Os01g73980 protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g55650.1 LOC_Os04g55650 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os09g38920.1 SAG12, LOC_Os09g38920 Senescence-specific cysteine protease SAG12... 0.02 OrthoFinder output from all 47 species
Lfl_g11792 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
MA_22695g0010 XBCP3 Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g03230.1 XCP1 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Mp6g12320.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp8g12950.1 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g15927 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g04414 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ore_g15182 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g16435 CP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g28669 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Ore_g28670 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Ore_g33814 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ore_g38388 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Ore_g42797 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ore_g42798 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Pir_g55407 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Smo270344 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo417054 XBCP3 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc02g076710.3.1 XBCP3, Solyc02g076710 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc02g076910.3.1 SAG12, Solyc02g076910 protease (Papain) 0.04 OrthoFinder output from all 47 species
Solyc03g111730.3.1 Solyc03g111730 protease (Papain) 0.03 OrthoFinder output from all 47 species
Solyc12g088670.2.1 RD21, RD21A,... Low-temperature-induced cysteine proteinase (Fragment)... 0.05 OrthoFinder output from all 47 species
Spa_g07399 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Spa_g24794 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Tin_g41755 No alias EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Zm00001e006743_P002 Zm00001e006743 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e028260_P001 XCP2, Zm00001e028260 Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e029667_P001 XCP2, Zm00001e029667 protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 OrthoFinder output from all 47 species
Zm00001e041788_P001 Zm00001e041788 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 43 99
IPR000118 Granulin 379 426
IPR000668 Peptidase_C1A_C 130 345
No external refs found!