Aliases : OTP84
Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 588.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00232800 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018262001 | No alias | Pentatricopeptide repeat-containing protein At2g44880... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01024588001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_03570 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_03579 | No alias | RNA editing factor (MEF12) | 0.06 | OrthoFinder output from all 47 species | |
Gb_06272 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_21054 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Gb_21442 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
Gb_28288 | CRR22 | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g02850.1 | OTP84, LOC_Os04g02850 | RNA editing factor (OTP84) | 0.03 | OrthoFinder output from all 47 species | |
Len_g19027 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g53944 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
MA_100606g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.08 | OrthoFinder output from all 47 species | |
MA_101084g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_10214098g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_10257685g0010 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
MA_10277392g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.08 | OrthoFinder output from all 47 species | |
MA_10426261g0020 | CRR22 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
MA_10428121g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g37170... | 0.07 | OrthoFinder output from all 47 species | |
MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.1 | OrthoFinder output from all 47 species | |
MA_10429540g0010 | LOI1, MEF11 | Pentatricopeptide repeat-containing protein At4g14850... | 0.15 | OrthoFinder output from all 47 species | |
MA_10429837g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.08 | OrthoFinder output from all 47 species | |
MA_10429958g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | OrthoFinder output from all 47 species | |
MA_10430355g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
MA_10431508g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.1 | OrthoFinder output from all 47 species | |
MA_10432670g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
MA_10436764g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.12 | OrthoFinder output from all 47 species | |
MA_104937g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
MA_107356g0010 | CRR2 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_112066g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.07 | OrthoFinder output from all 47 species | |
MA_11454g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g27610... | 0.08 | OrthoFinder output from all 47 species | |
MA_114565g0020 | OTP84 | Pentatricopeptide repeat-containing protein At5g16860... | 0.06 | OrthoFinder output from all 47 species | |
MA_114722g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
MA_116829g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.09 | OrthoFinder output from all 47 species | |
MA_11765g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_119635g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
MA_13022g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
MA_13057g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.1 | OrthoFinder output from all 47 species | |
MA_135424g0010 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.05 | OrthoFinder output from all 47 species | |
MA_136188g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_140591g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_16226g0010 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.06 | OrthoFinder output from all 47 species | |
MA_178429g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
MA_184104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
MA_185098g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.12 | OrthoFinder output from all 47 species | |
MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_189553g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
MA_205762g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_20585g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_20899g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.12 | OrthoFinder output from all 47 species | |
MA_210089g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
MA_24849g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_27147g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.04 | OrthoFinder output from all 47 species | |
MA_28390g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
MA_28607g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_30632g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_33151g0010 | OTP86 | Pentatricopeptide repeat-containing protein At1g18485... | 0.12 | OrthoFinder output from all 47 species | |
MA_3449g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
MA_3502g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.08 | OrthoFinder output from all 47 species | |
MA_35442g0010 | No alias | RNA editing factor (SLO2) | 0.1 | OrthoFinder output from all 47 species | |
MA_36643g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.08 | OrthoFinder output from all 47 species | |
MA_376862g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_38266g0010 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
MA_43727g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.11 | OrthoFinder output from all 47 species | |
MA_442926g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
MA_4503g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.08 | OrthoFinder output from all 47 species | |
MA_465411g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
MA_470679g0010 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.08 | OrthoFinder output from all 47 species | |
MA_481619g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
MA_483636g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.12 | OrthoFinder output from all 47 species | |
MA_49292g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | OrthoFinder output from all 47 species | |
MA_501007g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.11 | OrthoFinder output from all 47 species | |
MA_519985g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.09 | OrthoFinder output from all 47 species | |
MA_52613g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
MA_55967g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
MA_56322g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species | |
MA_56660g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
MA_59148g0010 | CRR22 | RNA editing factor (MEF11) | 0.09 | OrthoFinder output from all 47 species | |
MA_61422g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.08 | OrthoFinder output from all 47 species | |
MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
MA_632994g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.08 | OrthoFinder output from all 47 species | |
MA_6511g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
MA_65500g0010 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.05 | OrthoFinder output from all 47 species | |
MA_658463g0010 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_68718g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_71104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
MA_83662g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
MA_858608g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | OrthoFinder output from all 47 species | |
MA_90090g0010 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.04 | OrthoFinder output from all 47 species | |
MA_905781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.11 | OrthoFinder output from all 47 species | |
MA_921g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.15 | OrthoFinder output from all 47 species | |
MA_9384g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.05 | OrthoFinder output from all 47 species | |
MA_958908g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
MA_96662g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.13 | OrthoFinder output from all 47 species | |
MA_97789g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g26540... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 793 | 819 |
IPR002885 | Pentatricopeptide_repeat | 208 | 234 |
IPR002885 | Pentatricopeptide_repeat | 365 | 394 |
IPR002885 | Pentatricopeptide_repeat | 396 | 426 |
IPR002885 | Pentatricopeptide_repeat | 724 | 749 |
IPR002885 | Pentatricopeptide_repeat | 489 | 518 |
IPR002885 | Pentatricopeptide_repeat | 458 | 486 |
IPR002885 | Pentatricopeptide_repeat | 337 | 364 |
IPR002885 | Pentatricopeptide_repeat | 427 | 457 |
IPR032867 | DYW_dom | 823 | 873 |
IPR002885 | Pentatricopeptide_repeat | 135 | 183 |
IPR002885 | Pentatricopeptide_repeat | 265 | 311 |
IPR002885 | Pentatricopeptide_repeat | 650 | 698 |
IPR002885 | Pentatricopeptide_repeat | 549 | 596 |
No external refs found! |