LOC_Os02g42406 (Os02g0636300)


Aliases : Os02g0636300

Description : 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata. embryo defective 1586 (EMB1586)


Gene families : OG_01_0005036 (Gene family) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g42406
Cluster HCCA cluster: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G12770 ISE1, EMB1586 P-loop containing nucleoside triphosphate hydrolases... 0.12 Gene family
Cre07.g349300 No alias 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.04 Gene family
Cre07.g351600 No alias 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.02 Gene family
Solyc08g080550.1.1 Solyc08g080550.1 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.05 Gene family
Zm00001d017345 No alias 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 155 348
IPR001650 Helicase_C 420 526
No external refs found!