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  5. Gb_12488

Gb_12488 (ATHSP70, HSP70)


Aliases : ATHSP70, HSP70

Description : Probable mediator of RNA polymerase II transcription subunit 37e OS=Arabidopsis thaliana (sp|p22953|md37e_arath : 678.0)


Gene families : OG0000109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12488
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00199940 BIP, BIP2,... Luminal-binding protein OS=Solanum lycopersicum 0.05 OrthoFinder output from all 47 species
AMTR_s00029p00199970 BIP, BIP2,... Luminal-binding protein OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
AMTR_s00137p00032560 Hsp70b External stimuli response.temperature.Hsp... 0.05 OrthoFinder output from all 47 species
AT1G16030 Hsp70b heat shock protein 70B 0.02 OrthoFinder output from all 47 species
Adi_g035631 BIP, BIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015122 ATHSP70, HSP70 not classified & original description: CDS=1-1572 0.02 OrthoFinder output from all 47 species
Ceric.05G100200.1 ATHSP70, HSP70,... not classified & original description: pacid=50578971... 0.03 OrthoFinder output from all 47 species
Dac_g41592 ERD2, HSP70T-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g30480.1 BIP, BIP2, LOC_Os05g30480 Heat shock 70 kDa protein BIP3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os06g10990.1 BIP1, LOC_Os06g10990 Luminal-binding protein 4 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
MA_160636g0010 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder output from all 47 species
MA_5946738g0010 AT-HSC70-1,... Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder output from all 47 species
MA_817408g0010 Hsp70b chaperone (Hsp70) 0.04 OrthoFinder output from all 47 species
Mp2g08350.1 ATHSP70, HSP70 chaperone (Hsp70) 0.04 OrthoFinder output from all 47 species
Nbi_g26253 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08768 BIP, BIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63141 ATHSP70, HSP70 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c11_1010V3.1 ATHSP70, HSP70,... heat shock cognate protein 70-1 0.02 OrthoFinder output from all 47 species
Solyc06g005440.1.1 Solyc06g005440 Heat shock cognate 70 kDa protein OS=Petunia hybrida... 0.04 OrthoFinder output from all 47 species
Solyc06g076020.3.1 ATHSP70, HSP70,... chaperone (Hsp70) 0.04 OrthoFinder output from all 47 species
Solyc12g042560.3.1 Hsp70b, Solyc12g042560 Heat shock 70 kDa protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 11 615
No external refs found!