Gb_12483

Description : effector receptor (NLR)

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_12483

Target	Alias	Description	ECC score	Gene Family Method
AT1G56510	WRR4, ADR2	Disease resistance protein (TIR-NBS-LRR class)	0.03	OrthoFinder output from all 47 species
AT1G57650	No alias	ATP binding	0.03	OrthoFinder output from all 47 species
AT3G44630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G41750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
Aspi01Gene34778.t1	Aspi01Gene34778	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene45474.t1	Aspi01Gene45474	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_12366	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_14963	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_17461	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_20301	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
Gb_21496	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_23545	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_25646	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_26262	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_27126	No alias	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
Gb_27866	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_29198	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.05	OrthoFinder output from all 47 species
Gb_36252	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_36919	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_12334g0020	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_162592g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_2938841g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
MA_55143g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_85844g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Pir_g20725	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g24673	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g31750	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g38153	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g45122	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c10_20790V3.1	Pp3c10_20790	disease resistance protein (TIR-NBS-LRR class)	0.04	OrthoFinder output from all 47 species
Pp3c10_4170V3.1	Pp3c10_4170	disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Pp3c16_21740V3.1	Pp3c16_21740	No annotation	0.02	OrthoFinder output from all 47 species
Pp3c20_22230V3.1	Pp3c20_22230	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
Pp3c4_30410V3.1	Pp3c4_30410	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Solyc02g082050.3.1	Solyc02g082050	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	211	436
IPR000157	TIR_dom	18	199

External Links

No external refs found!

Gb_12483

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation