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  5. Gb_12380

Gb_12380


Description : LRR-domain extensin


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.03 OrthoFinder output from all 47 species
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.03 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g13705 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53230.t1 LRX2, Aspi01Gene53230 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.04 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14310 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15319 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11931 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g08470.1 LOC_Os01g08470 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Len_g24034 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19666 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23899 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09607 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17890 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Spa_g02389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06078 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09054 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13067 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005974_P001 Zm00001e005974 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 77 113
No external refs found!