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  5. Gb_12376

Gb_12376 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader (MBD5-6)


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12376

Target Alias Description ECC score Gene Family Method Actions
AT3G46580 MBD05, MBD5, ATMBD5 methyl-CPG-binding domain protein 5 0.03 OrthoFinder output from all 47 species
Adi_g058770 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09047 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11443 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26138 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07123 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g61579 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42606 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13428 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03371 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17409 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03419 MBD05, MBD5, ATMBD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09473 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16545 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38605 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080690.4.1 Solyc08g080690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g068740.2.1 MBD05, MBD5,... methylation reader (MBD5-6) 0.03 OrthoFinder output from all 47 species
Tin_g12365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 519 569
No external refs found!