Aliases : CRR22
Description : RNA editing factor (OTP82)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
AT1G06140 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT2G13600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G20540 | MEF21 | mitochondrial editing factor 21 | 0.04 | OrthoFinder output from all 47 species | |
AT2G27610 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT2G41080 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G03580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT3G08820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
AT3G23330 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G20770 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G21065 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G38010 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G16860 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G46460 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01000936001 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01004939001 | RARE1 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009866001 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011887001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017996001 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018018001 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01021023001 | No alias | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01022230001 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024061001 | No alias | Pentatricopeptide repeat-containing protein At2g21090... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024912001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01027839001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01030248001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032394001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032994001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01033837001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01035491001 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01037258001 | No alias | Pentatricopeptide repeat-containing protein At5g27110... | 0.04 | OrthoFinder output from all 47 species | |
Gb_18462 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
Gb_24823 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_32256 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_33311 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36839 | OTP84 | Pentatricopeptide repeat-containing protein At4g13650... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os01g40720.1 | LOC_Os01g40720 | RNA editing factor (MEF7) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g60250.1 | LOC_Os01g60250 | Pentatricopeptide repeat-containing protein At3g14730... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g08680.1 | LOC_Os03g08680 | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os04g33840.1 | LOC_Os04g33840 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g49740.1 | EMB2744, LOC_Os05g49740 | Pentatricopeptide repeat-containing protein At5g39680... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os06g40860.1 | LOC_Os06g40860 | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g20420.1 | LOC_Os07g20420 | Pentatricopeptide repeat-containing protein At3g26782,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g04400.1 | LOC_Os08g04400 | Pentatricopeptide repeat-containing protein At5g50390,... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os08g33700.1 | LOC_Os08g33700 | Pentatricopeptide repeat-containing protein At3g47530... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g06070.1 | LOC_Os12g06070 | Pentatricopeptide repeat-containing protein At5g04780,... | 0.05 | OrthoFinder output from all 47 species | |
MA_100287g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
MA_10138132g0010 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.06 | OrthoFinder output from all 47 species | |
MA_122899g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
MA_138689g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
MA_139163g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
MA_141034g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_210823g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g37170... | 0.04 | OrthoFinder output from all 47 species | |
MA_211508g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.09 | OrthoFinder output from all 47 species | |
MA_25729g0010 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.11 | OrthoFinder output from all 47 species | |
MA_41676g0020 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
MA_53781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.1 | OrthoFinder output from all 47 species | |
MA_6527g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
MA_73895g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.07 | OrthoFinder output from all 47 species | |
MA_74986g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | OrthoFinder output from all 47 species | |
MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g065030.1.1 | EMB2758, Solyc02g065030 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g076700.1.1 | Solyc02g076700 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g079260.2.1 | Solyc02g079260 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g082160.2.1 | CRR22, Solyc02g082160 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g068810.4.1 | Solyc06g068810 | Pentatricopeptide repeat-containing protein At5g50990... | 0.05 | OrthoFinder output from all 47 species | |
Solyc11g008970.1.1 | Solyc11g008970 | Pentatricopeptide repeat-containing protein At4g39952,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g017290.1.1 | Solyc11g017290 | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g040060.3.1 | EMB2758, Solyc11g040060 | Pentatricopeptide repeat-containing protein At4g33990... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e008203_P002 | Zm00001e008203 | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e011519_P001 | Zm00001e011519 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018565_P001 | Zm00001e018565 | Pentatricopeptide repeat-containing protein At3g13880... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e019971_P001 | Zm00001e019971 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023504_P001 | CRR22, Zm00001e023504 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e025557_P001 | Zm00001e025557 | Pentatricopeptide repeat-containing protein At5g56310... | 0.14 | OrthoFinder output from all 47 species | |
Zm00001e033171_P001 | Zm00001e033171 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 354 | 401 |
IPR002885 | Pentatricopeptide_repeat | 657 | 704 |
IPR002885 | Pentatricopeptide_repeat | 252 | 300 |
IPR002885 | Pentatricopeptide_repeat | 152 | 199 |
IPR002885 | Pentatricopeptide_repeat | 455 | 501 |
IPR002885 | Pentatricopeptide_repeat | 556 | 603 |
IPR032867 | DYW_dom | 830 | 954 |
IPR002885 | Pentatricopeptide_repeat | 732 | 755 |
No external refs found! |