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  5. Gb_12358

Gb_12358


Description : Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana (sp|q9lil5|pp233_arath : 367.0)


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12358

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00153760 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT3G25210 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Ehy_g14509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12910 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.03 OrthoFinder output from all 47 species
Gb_22860 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.04 OrthoFinder output from all 47 species
Mp2g09100.1 No alias Pentatricopeptide repeat-containing protein At3g06920... 0.02 OrthoFinder output from all 47 species
Pir_g00998 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e005655_P001 Zm00001e005655 Pentatricopeptide repeat-containing protein At3g22670,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 552 591
IPR002885 Pentatricopeptide_repeat 346 394
IPR002885 Pentatricopeptide_repeat 451 496
IPR002885 Pentatricopeptide_repeat 521 549
IPR002885 Pentatricopeptide_repeat 420 447
IPR002885 Pentatricopeptide_repeat 243 271
No external refs found!