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  5. Gb_12342

Gb_12342


Description : no hits & (original description: none)


Gene families : OG0001280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12342
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G30550 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
Adi_g085435 No alias trimethylguanosine synthase *(TGS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01928.t2 Aspi01Gene01928 trimethylguanosine synthase *(TGS1) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0611.g079336 No alias trimethylguanosine synthase *(TGS1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s1770.g106724 No alias trimethylguanosine synthase *(TGS1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g44462 No alias trimethylguanosine synthase *(TGS1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G011300.1 Ceric.27G011300 trimethylguanosine synthase *(TGS1) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08800.1 LOC_Os06g08800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12706 No alias trimethylguanosine synthase *(TGS1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27649 No alias trimethylguanosine synthase *(TGS1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!