Gb_12328 (ATCIMS, ATMS1, ATMETS)

Aliases : ATCIMS, ATMS1, ATMETS

Description : 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 OS=Oryza sativa subsp. japonica (sp|q2qly4|mete2_orysj : 221.0)

Gene families : OG0000901 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000901_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_12328

Target	Alias	Description	ECC score	Gene Family Method	Actions
Aob_g05268	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ehy_g08676	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008172	S-methyltransferase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015996	chlorophyll catabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033015	tetrapyrrole catabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046149	pigment catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
MF	GO:0047746	chlorophyllase activity	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002629	Met_Synth_C/arc	1	108

External Links

No external refs found!

Gb_12328 (ATCIMS, ATMS1, ATMETS)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation