LOC_Os02g42040 (Os02g0631500, Os02g0631601)


Aliases : Os02g0631500, Os02g0631601

Description : 29.2.99 protein.synthesis.misc bindingRNA binding


Gene families : OG_01_0002987 (Gene family) Phylogenetic Tree(s): OG0002987_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g42040
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G39260 No alias binding;RNA binding 0.05 Gene family
Cpa|evm.model.tig00022080.18 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.02 Gene family
Cre17.g729250 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.03 Gene family
GSVIVT01016353001 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.11 Gene family
MA_10437229g0010 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.02 Gene family
Smo440923 PACid_15408682 No description available 0.04 Gene family
Solyc04g049770.3.1 Solyc04g049770.3 29.2.99 protein.synthesis.misc bindingRNA binding 0.05 Gene family
Zm00001d017303 GRMZM2G042173 29.2.99 protein.synthesis.misc bindingRNA binding 0.04 Gene family
Zm00001d051183 GRMZM2G418604 29.2.99 protein.synthesis.misc bindingRNA binding 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 386 572
IPR003890 MIF4G-like_typ-3 590 784
IPR007193 Upf2/Nmd2_C 906 1041
No external refs found!