LOC_Os02g41800 (Os02g0628600)


Aliases : Os02g0628600

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus. auxin response factor 16 (ARF16)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g41800
Cluster HCCA cluster: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.03 Gene family
LOC_Os04g56850 Os04g0664400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc06g075150.3.1 Solyc06g075150.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d001945 GRMZM2G034840 No description available 0.02 Gene family
Zm00001d038698 GRMZM2G441325 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 271 354
IPR003340 B3_DNA-bd 120 221
No external refs found!