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  5. Gb_11984

Gb_11984 (AtOCT1, 1-Oct)


Aliases : AtOCT1, 1-Oct

Description : organic cation transporter (OCT)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11984

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00126560 AtOCT4, 4-Oct,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AT3G20660 AtOCT4, 4-Oct organic cation/carnitine transporter4 0.04 OrthoFinder output from all 47 species
Adi_g045207 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13866 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51667 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012912001 AtOCT1, 1-Oct Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
MA_29857g0020 AtOCT1, 1-Oct organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
Ore_g41926 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013040 AtOCT4, 4-Oct organic cation transporter *(OCT) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g063930.4.1 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
Solyc12g017380.3.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Tin_g41783 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006854_P001 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 134 516
No external refs found!