LOC_Os02g41670 (Os02g0626600)


Aliases : Os02g0626600

Description : 16.2.1.1 secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).


Gene families : OG_01_0000256 (Gene family) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g41670
Cluster HCCA cluster: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.05 Gene family
AT3G10340 PAL4 phenylalanine ammonia-lyase 4 0.02 Gene family
GSVIVT01006148001 No alias No description available 0.02 Gene family
GSVIVT01015124001 No alias No description available 0.06 Gene family
GSVIVT01015138001 No alias No description available 0.05 Gene family
GSVIVT01015140001 No alias No description available 0.02 Gene family
GSVIVT01024292001 No alias No description available 0.03 Gene family
GSVIVT01024294001 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
GSVIVT01024295001 No alias No description available 0.03 Gene family
GSVIVT01024299001 No alias No description available 0.04 Gene family
GSVIVT01024306001 No alias No description available 0.04 Gene family
GSVIVT01024315001 No alias No description available 0.04 Gene family
GSVIVT01025703001 No alias No description available 0.06 Gene family
LOC_Os02g41650 Os02g0626400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
LOC_Os04g43760 Os04g0518100 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.05 Gene family
LOC_Os04g43800 Os04g0518400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
MA_44561g0010 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
MA_73113g0010 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
Solyc03g036470.2.1 Solyc03g036470.2 No description available 0.03 Gene family
Solyc03g036473.1.1 Solyc03g036473.1 No description available 0.03 Gene family
Solyc03g042560.2.1 Solyc03g042560.2 No description available 0.03 Gene family
Solyc05g056170.3.1 Solyc05g056170.3 No description available 0.03 Gene family
Solyc09g007910.3.1 Solyc09g007910.3 No description available 0.02 Gene family
Solyc10g011920.2.1 Solyc10g011920.2 No description available 0.04 Gene family
Solyc10g086180.2.1 Solyc10g086180.2 No description available 0.02 Gene family
Zm00001d017274 GRMZM2G074604 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
Zm00001d017275 GRMZM2G029048 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
Zm00001d017276 GRMZM2G334660 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Zm00001d033286 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
Zm00001d051161 GRMZM2G160541 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Zm00001d051163 GRMZM2G081582 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Zm00001d051166 GRMZM2G063917 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
Zm00001d053619 GRMZM2G153871 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 62 530
No external refs found!