LOC_Os02g41650 (Os02g0626400)


Aliases : Os02g0626400

Description : 16.2.1.1 secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).


Gene families : OG_01_0000256 (Gene family) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g41650
Cluster HCCA cluster: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.04 Gene family
AT3G53260 ATPAL2, PAL2 phenylalanine ammonia-lyase 2 0.09 Gene family
GSVIVT01016257001 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
GSVIVT01025214001 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
GSVIVT01025703001 No alias No description available 0.03 Gene family
LOC_Os02g41670 Os02g0626600 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
LOC_Os04g43800 Os04g0518400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.01 Gene family
MA_123220g0010 No alias No description available 0.1 Gene family
MA_44561g0010 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
Solyc05g056170.3.1 Solyc05g056170.3 No description available 0.07 Gene family
Solyc09g007910.3.1 Solyc09g007910.3 No description available 0.07 Gene family
Zm00001d003016 GRMZM2G441347 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.06 Gene family
Zm00001d017274 GRMZM2G074604 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.06 Gene family
Zm00001d017275 GRMZM2G029048 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.07 Gene family
Zm00001d033286 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.01 Gene family
Zm00001d051163 GRMZM2G081582 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 66 539
No external refs found!