LOC_Os02g41470 (Os02g0623500)


Aliases : Os02g0623500

Description : 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype. OVULE ABORTION 5 (OVA5)


Gene families : OG_01_0003021 (Gene family) Phylogenetic Tree(s): OG0003021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g41470
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G13490 OVA5, ATKRS-2 Lysyl-tRNA synthetase, class II 0.08 Gene family
Cpa|evm.model.tig00001164.1 No alias No description available 0.01 Gene family
Cpa|evm.model.tig00001164.2 No alias 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes... 0.02 Gene family
GSVIVT01025473001 No alias 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes... 0.14 Gene family
MA_10430100g0010 No alias 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes... 0.02 Gene family
MA_107906g0010 No alias 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes... 0.06 Gene family
Smo79851 PACid_15405174 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes... 0.03 Gene family
Solyc01g005540.3.1 Solyc01g005540.3 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes... 0.15 Gene family
Zm00001d034764 GRMZM2G155899 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes... 0.02 Gene family
Zm00001d034766 GRMZM2G118062 29.1.6 protein.aa activation.lysine-tRNA ligase Encodes... 0.12 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 124 202
IPR004364 aa-tRNA-synt_II 219 582
No external refs found!