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  5. Gb_11632

Gb_11632


Description : Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana (sp|q9m3g7|atm_arath : 88.2)


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11632

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00208300 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035473 No alias not classified & original description: CDS=1-4050 0.02 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.03 OrthoFinder output from all 47 species
Ceric.24G040200.1 Ceric.24G040200 not classified & original description: pacid=50630010... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.1 CHR01, CHR1,... No description available 0.01 OrthoFinder output from all 47 species
Cre06.g270700 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g19973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g38800.2 LOC_Os05g38800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g19810.1 LOC_Os11g19810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434021g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g20276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32524 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 281 368
No external refs found!