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  5. Gb_11304

Gb_11304 (FKP1, EMB2778, MVA1, HMGS)


Aliases : FKP1, EMB2778, MVA1, HMGS

Description : 3-hydroxy-3-methylglutaryl-CoA synthase


Gene families : OG0002570 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


About
Type Description Actions
Neighborhood HRR: Gb_11304
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aev_g19192 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Gb_39796 FKP1, EMB2778, MVA1, HMGS 3-hydroxy-3-methylglutaryl-CoA synthase 0.03 OrthoFinder output from all 47 species
MA_261222g0010 FKP1, EMB2778, MVA1, HMGS 3-hydroxy-3-methylglutaryl-CoA synthase 0.02 OrthoFinder output from all 47 species
Mp4g22640.1 FKP1, EMB2778, MVA1, HMGS 3-hydroxy-3-methylglutaryl-CoA synthase 0.03 OrthoFinder output from all 47 species
Msp_g06932 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12122 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g21030 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g27559 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080170.3.1 FKP1, EMB2778,... 3-hydroxy-3-methylglutaryl-CoA synthase 0.04 OrthoFinder output from all 47 species
Spa_g31141 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEA Interproscan
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013528 HMG_CoA_synth_N 8 70
IPR013746 HMG_CoA_synt_C_dom 71 341
No external refs found!