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  5. Gb_11287

Gb_11287


Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11287
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00051600 ERD4,... Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
AT1G69450 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 OrthoFinder output from all 47 species
Adi_g017299 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03492 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63971.t1 ERD4, Aspi01Gene63971 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g059933 No alias calcium-permeable channel *(OSCA) & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0795.g087273 ERD4 not classified & original description: CDS=84-998 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.39 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre08.g360600 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
Cre09.g399912 No alias CSC1-like protein At3g21620 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g07879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26577 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40944 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.05 OrthoFinder output from all 47 species
GSVIVT01011097001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.04 OrthoFinder output from all 47 species
Gb_06755 RXW8 CSC1-like protein RXW8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_08557 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
LOC_Os01g72210.1 LOC_Os01g72210 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
MA_10428463g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_339268g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_99251g0010 ERD4 calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species
Mp8g07950.1 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Ore_g20127 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 232 294
IPR003864 CSC1/OSCA1-like_7TM 305 577
IPR032880 Csc1/OSCA1-like_N 7 178
No external refs found!