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Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 619.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_11220 | |
| Cluster | HCCA: Cluster_120 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00032470 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00011p00266560 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00012p00252800 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00242080 | CRR28,... | Pentatricopeptide repeat-containing protein At1g59720,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00155620 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00235510 | OTP84,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00031420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00098p00155650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g39350... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00111p00107400 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00130p00019530 | DOT4,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G57430 | OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G63370 | OTP86 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G44785 | OSB3 | organellar single-stranded DNA binding protein 3 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g002881 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004462 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007209 | OTP81 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015823 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g065393 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066584 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g098725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17653 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g34016 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07022 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18398 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19247 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30841 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30874 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g37786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g38061 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0104.g044769 | No alias | not classified & original description: CDS=1-2490 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G011400.1 | Ceric.27G011400 | not classified & original description: pacid=50605728... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g05121 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35972 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g21154 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26408 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36116 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47860 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47861 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000178001 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008965001 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009227001 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015466001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017209001 | VAC1, ECB2, ATECB2 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017996001 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023971001 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01036207001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_03221 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07756 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_17295 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32439 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_35258 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_37254 | OTP84 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40381 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_41801 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g62910.1 | CRR2, LOC_Os01g62910 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g04390.1 | LOC_Os03g04390 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g11700.1 | MEF19, LOC_Os03g11700 | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g57940.1 | CRR22, LOC_Os04g57940 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_102449g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428421g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430171g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_104937g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_117650g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_123466g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_136188g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_140208g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_140591g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_205762g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_20746g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_210089g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| MA_27147g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_43615g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_472579g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
| MA_66417g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| MA_835083g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_83898g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_858608g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_953793g0020 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28092 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48606 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02390 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g45078 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03091 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g04265 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14886 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18881 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31070 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g33120 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g40056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g44900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53972 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g55034 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g56081 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59303 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002209 | No alias | not classified & original description: CDS=347-2416 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0140.g022672 | No alias | not classified & original description: CDS=1-3558 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0264.g026932 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g05074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33428 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo115259 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Smo17005 | PDE247, CLB19 | Pentatricopeptide repeat-containing protein At2g17210... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g098150.3.1 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g065030.1.1 | EMB2758, Solyc02g065030 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g070710.3.1 | Solyc02g070710 | Pentatricopeptide repeat-containing protein At3g20730... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g007840.1.1 | Solyc03g007840 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g116000.1.1 | Solyc03g116000 | Pentatricopeptide repeat-containing protein At3g47530... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g119950.1.1 | VAC1, ECB2,... | RNA editing factor (ECB2/VAC1) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g009000.1.1 | Solyc04g009000 | RNA editing factor (SLO2) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g048900.1.1 | Solyc06g048900 | Pentatricopeptide repeat-containing protein At2g40720... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g013850.1.1 | CRR21, Solyc08g013850 | RNA editing factor (CRR21) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g017370.3.1 | Solyc11g017370 | RNA editing factor (AEF1) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g006575.1.1 | OTP82, Solyc12g006575 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23504 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26788 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g29031 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000301_P001 | Zm00001e000301 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018565_P001 | Zm00001e018565 | Pentatricopeptide repeat-containing protein At3g13880... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021457_P001 | CRR22, Zm00001e021457 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022858_P001 | Zm00001e022858 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023498_P001 | VAC1, ECB2,... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027846_P001 | CRR21, Zm00001e027846 | RNA editing factor (CRR21) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030831_P001 | Zm00001e030831 | Pentatricopeptide repeat-containing protein At3g20730... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031351_P001 | EMB2261, Zm00001e031351 | RNA editing factor (ECD1) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034445_P001 | LPA66, Zm00001e034445 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035654_P001 | EMB2758, Zm00001e035654 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |