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  5. Gb_10910

Gb_10910 (LRX2)


Aliases : LRX2

Description : LRR-domain extensin


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10910
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.06 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.03 OrthoFinder output from all 47 species
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.07 OrthoFinder output from all 47 species
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.07 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03898 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26231 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18015 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21090 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21238 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.06 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04597 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14310 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G022500.1 Ceric.16G022500 LRR-domain extensin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G073600.1 LRX2, Ceric.24G073600 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07517 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15033 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31890 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015276001 No alias Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
GSVIVT01015416001 No alias Leucine-rich repeat extensin-like protein 4... 0.03 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08470.1 LOC_Os01g08470 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07990.1 LOC_Os07g07990 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_100985g0010 LRX2 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
MA_7188g0010 LRX2 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.05 OrthoFinder output from all 47 species
Msp_g06483 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07695 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39205 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05430 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11374 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19666 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23899 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03283 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.04 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc04g078560.1.1 Solyc04g078560 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g05733 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06078 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37100 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005974_P001 Zm00001e005974 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.03 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 83 115
No external refs found!