Gb_10893 (MCM2, ATMCM2)

Aliases : MCM2, ATMCM2

Description : component MCM2 of MCM replicative DNA helicase complex

Gene families : OG0004206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004206_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_10893
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00242770	MCM2, ATMCM2,...	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.12	OrthoFinder output from all 47 species
AT1G44900	MCM2, ATMCM2	minichromosome maintenance (MCM2/3/5) family protein	0.13	OrthoFinder output from all 47 species
Aev_g18657	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Ala_g28049	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Als_g05684	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Als_g06371	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.1	OrthoFinder output from all 47 species
Aop_g09602	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.17	OrthoFinder output from all 47 species
Aspi01Gene05001.t1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.09	OrthoFinder output from all 47 species
Azfi_s0207.g057897	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.06	OrthoFinder output from all 47 species
Ceric.10G002200.1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.13	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020554.77	MCM2, ATMCM2	DNA replication licensing factor MCM2 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
Cre07.g338000	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.1	OrthoFinder output from all 47 species
Dac_g07583	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Dcu_g07094	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Ehy_g18175	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
GSVIVT01001119001	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.25	OrthoFinder output from all 47 species
LOC_Os11g29380.1	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.13	OrthoFinder output from all 47 species
Len_g09187	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.1	OrthoFinder output from all 47 species
Lfl_g39064	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.06	OrthoFinder output from all 47 species
MA_10431703g0010	MCM2, ATMCM2	DNA replication licensing factor MCM2 OS=Oryza sativa...	0.19	OrthoFinder output from all 47 species
Mp3g00130.1	MCM2, ATMCM2	component MCM2 of MCM replicative DNA helicase complex	0.17	OrthoFinder output from all 47 species
Msp_g13902	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Nbi_g03122	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.09	OrthoFinder output from all 47 species
Ppi_g15758	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023976	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Sam_g04440	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g14284	No alias	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Sam_g14285	No alias	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Smo88537	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.02	OrthoFinder output from all 47 species
Solyc11g040120.3.1	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.13	OrthoFinder output from all 47 species
Spa_g05361	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Tin_g44536	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.11	OrthoFinder output from all 47 species
Zm00001e021446_P001	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.14	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001208	MCM_dom	38	260
IPR041562	MCM_lid	297	380

External Links

No external refs found!

Gb_10893 (MCM2, ATMCM2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation