Gb_10845 (LOV1)

Aliases : LOV1

Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum (sp|q7xa40|rga3_solbu : 123.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_10845
Cluster	HCCA: Cluster_159

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00245940	evm_27.TU.AmTr_v1...	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT1G59780	No alias	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT3G50950	ZAR1	HOPZ-ACTIVATED RESISTANCE 1	0.04	OrthoFinder output from all 47 species
Aob_g22709	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01012168001	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01026747001	No alias	Putative disease resistance protein At1g50180...	0.02	OrthoFinder output from all 47 species
Gb_25815	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.04	OrthoFinder output from all 47 species
Gb_35026	ZAR1	Disease resistance protein RPP8 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc04g009240.2.1	RPP13, Solyc04g009240	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc04g009660.2.1	RPP13, Solyc04g009660	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc04g009690.2.1	RPP13, Solyc04g009690	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc04g025820.1.1	RPP13, Solyc04g025820	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	4	147

External Links

No external refs found!

Gb_10845 (LOV1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation