Mp2g19910.1

Description : component SPT20/ADA5 of SAGA transcription co-activator complex

Gene families : OG_01_0005278 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005278_tree ,
OG_02_0005424 (LandPlants) Phylogenetic Tree(s): OG_02_0005424_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp2g19910.1
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AT1G72390	No alias	CONTAINS InterPro DOMAIN/s: Spt20 family...	0.03	Archaeplastida
GSVIVT01016716001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.02	Archaeplastida
LOC_Os10g25200.1	No alias	component SPT20/ADA5 of SAGA transcription co-activator complex	0.04	Archaeplastida
MA_10436298g0010	No alias	component SPT20/ADA5 of SAGA transcription co-activator complex	0.04	Archaeplastida
MA_10436398g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c13_8340V3.1	No alias	No annotation	0.03	Archaeplastida
Pp3c3_3510V3.1	No alias	No annotation	0.02	Archaeplastida
Solyc06g063010.4.1	No alias	component SPT20/ADA5 of SAGA transcription co-activator complex	0.02	Archaeplastida
AT1G72390	No alias	CONTAINS InterPro DOMAIN/s: Spt20 family...	0.02	LandPlants
GSVIVT01016716001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.02	LandPlants
LOC_Os10g25200.1	No alias	component SPT20/ADA5 of SAGA transcription co-activator complex	0.03	LandPlants
MA_10436298g0010	No alias	component SPT20/ADA5 of SAGA transcription co-activator complex	0.02	LandPlants
MA_10436398g0010	No alias	no hits & (original description: none)	0.02	LandPlants
Pp3c13_8340V3.1	No alias	No annotation	0.03	LandPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0000124	SAGA complex	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0070461	SAGA-type complex	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905368	peptidase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR021950	Spt20	164	294

External Links

No external refs found!