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  5. Gb_10779

Gb_10779


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 211.0)


Gene families : OG0013857 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013857_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10779
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Gb_02860 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05901 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_13887 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_24100 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 819 908
No external refs found!