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  5. Gb_10732

Gb_10732


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10732
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT4G16950 RPP5 Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G11250 No alias Disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from all 47 species
AT5G36930 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G46490 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Adi_g060996 No alias plastidial ribosome biogenesis factor *(PAC) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01029009001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01034461001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.04 OrthoFinder output from all 47 species
Gb_04748 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_04749 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_07498 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_12319 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_12960 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_20223 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Gb_25646 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_26048 No alias effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
Gb_26262 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Gb_29198 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_32215 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Lfl_g24980 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc01g008800.3.1 Solyc01g008800 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Solyc05g007850.2.1 Solyc05g007850 effector receptor (NLR) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 7 150
No external refs found!