- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : AML1, RPS5A, ATRPS5A
Description : component RPS5 of SSU proteome
Gene families : OG0002478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002478_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00068p00119380 | RPS5B, ATRPS5B,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
| AMTR_s00090p00050460 | RPS5B, ATRPS5B,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | OrthoFinder output from all 47 species | |
| AT2G37270 | RPS5B, ATRPS5B | ribosomal protein 5B | 0.17 | OrthoFinder output from all 47 species | |
| AT3G11940 | AML1, RPS5A, ATRPS5A | ribosomal protein 5A | 0.18 | OrthoFinder output from all 47 species | |
| Adi_g078109 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g078110 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g00869 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g01983 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024587 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0374.g067208 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Cba_g20695 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G021200.1 | AML1, RPS5A,... | component *(uS7) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.09G021300.1 | RPS5B, ATRPS5B,... | component *(uS7) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G021600.1 | AML1, RPS5A,... | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021332.10 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Cre06.g290950 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.18 | OrthoFinder output from all 47 species | |
| Dac_g10905 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g12789 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g00502 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01026328001 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | OrthoFinder output from all 47 species | |
| GSVIVT01033419001 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | OrthoFinder output from all 47 species | |
| LOC_Os01g01060.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os11g29190.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Len_g06369 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g09112 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g46814 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| MA_10428487g0010 | RPS5B, ATRPS5B | component RPS5 of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| Mp3g10570.1 | RPS5B, ATRPS5B | component RPS5 of SSU proteome | 0.17 | OrthoFinder output from all 47 species | |
| Nbi_g09424 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10573 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c20_18970V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c23_6150V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.11 | OrthoFinder output from all 47 species | |
| Pp3c8_16820V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.1 | OrthoFinder output from all 47 species | |
| Pp3c8_16860V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.15 | OrthoFinder output from all 47 species | |
| Ppi_g23590 | AML1, RPS5A, ATRPS5A | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g62524 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0035.g011476 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15969 | No alias | component *(uS7) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Smo164593 | AML1, RPS5A, ATRPS5A | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Smo271466 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc10g078620.1.1 | AML1, RPS5A,... | component RPS5 of SSU proteome | 0.17 | OrthoFinder output from all 47 species | |
| Solyc11g042610.2.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.14 | OrthoFinder output from all 47 species | |
| Spa_g17272 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g37870 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g01481 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e025608_P002 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.18 | OrthoFinder output from all 47 species | |
| Zm00001e031425_P002 | AML1, RPS5A,... | component RPS5 of SSU proteome | 0.15 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023798 | Ribosomal_S7_dom | 66 | 207 |
| No external refs found! |