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  5. Gb_10394

Gb_10394 (ARR1, RR1)


Aliases : ARR1, RR1

Description : B-type cytokinin ARR response activator. transcription factor (ARR-B)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10394
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00128190 evm_27.TU.AmTr_v1... Transcription factor LUX OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G67710 ARR11 response regulator 11 0.03 OrthoFinder output from all 47 species
Aev_g04858 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06631 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ala_g02179 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22263 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19248 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29501 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44133 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03227 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Aob_g06717 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15800 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30687.t1 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G008700.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cre02.g083750 LUX, PCL1 Transcription factor BOA OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre05.g243000 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
Dde_g05377 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40960 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ehy_g04944 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05928 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11168 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ehy_g14477 RR14, ARR14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01010627001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
GSVIVT01024916001 LUX, PCL1 Multi-process regulation.circadian clock.evening element... 0.04 OrthoFinder output from all 47 species
GSVIVT01025785001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_37200 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
LOC_Os01g67770.1 ARR11, LOC_Os01g67770 B-type cytokinin ARR response activator. transcription... 0.06 OrthoFinder output from all 47 species
LOC_Os05g34110.1 LOC_Os05g34110 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g24241 No alias MYB-RELATED transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26067 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_114951g0010 ARR11 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
MA_12161g0010 RR14, ARR14 Two-component response regulator ORR23 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_17547g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_601142g0010 RR2, ARR2 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
MA_83273g0010 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.08 OrthoFinder output from all 47 species
Msp_g15649 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05431 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34775 LUX, PCL1 MYB-RELATED transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c11_21510V3.1 ARR11, Pp3c11_21510 response regulator 2 0.02 OrthoFinder output from all 47 species
Ppi_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ppi_g05219 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32628 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0331.g027260 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Solyc01g065540.3.1 ARR1, RR1, Solyc01g065540 B-type cytokinin ARR response activator. transcription... 0.06 OrthoFinder output from all 47 species
Solyc07g005140.4.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Spa_g22337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22513 RR12, ARR12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e030516_P001 RR12, ARR12,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 77 186
IPR001005 SANT/Myb 245 295
No external refs found!