1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_10259

Gb_10259 (ICU4, ATHB15, ATHB-15, CNA)


Aliases : ICU4, ATHB15, ATHB-15, CNA

Description : transcription factor (HD-ZIP III)


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10259

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00069240 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.05 OrthoFinder output from all 47 species
AT5G60690 IFL1, IFL, REV Homeobox-leucine zipper family protein / lipid-binding... 0.02 OrthoFinder output from all 47 species
Adi_g022450 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36023 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07482 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09861 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g34188 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27214.t2 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G020900.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G068400.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.23G045900.1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.05 OrthoFinder output from all 47 species
Dac_g22355 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g43930.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.07 OrthoFinder output from all 47 species
LOC_Os12g41860.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Len_g10271 HB-8, ATHB8, ATHB-8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10334 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g19005 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10205 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10862 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429434g0010 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.07 OrthoFinder output from all 47 species
MA_10435903g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
MA_110407g0010 HB-8, ATHB8, ATHB-8 Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_112057g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
MA_19520g0020 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
MA_41083g0010 PHV, ATHB9 pepsin-type protease 0.07 OrthoFinder output from all 47 species
Mp1g24140.1 HB-8, ATHB8, ATHB-8 transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Sam_g10819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g024070.3.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Solyc03g120910.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Solyc08g066500.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Solyc11g069470.3.1 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
Spa_g05254 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000073_P001 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e004553_P004 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e005034_P001 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e025995_P002 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e039093_P002 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 175 376
IPR013978 MEKHLA 710 852
IPR001356 Homeobox_dom 18 75
No external refs found!