1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_09620

Gb_09620 (emb2411)


Aliases : emb2411

Description : DNA replication auxiliary factor (JHS1/DNA2)


Gene families : OG0006070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006070_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09620
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00216230 emb2411,... Cell cycle.interphase.DNA... 0.03 OrthoFinder output from all 47 species
Ceric.35G004800.1 emb2411, Ceric.35G004800 DNA replication auxiliary factor *(JHS1/DNA2) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000852.40 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g528200 emb2411 Cell cycle.interphase.DNA... 0.02 OrthoFinder output from all 47 species
LOC_Os04g49860.1 emb2411, LOC_Os04g49860 DNA replication auxiliary factor (JHS1/DNA2) 0.04 OrthoFinder output from all 47 species
Solyc01g088380.3.1 emb2411, Solyc01g088380 DNA replication auxiliary factor (JHS1/DNA2) 0.05 OrthoFinder output from all 47 species
Zm00001e007116_P001 emb2411, Zm00001e007116 DNA replication auxiliary factor (JHS1/DNA2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 1174 1377
IPR014808 DNA_replication_fac_Dna2_N 423 625
IPR041677 DNA2/NAM7_AAA_11 997 1085
IPR041677 DNA2/NAM7_AAA_11 1098 1164
No external refs found!