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  5. Gb_09614

Gb_09614


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 258.0)


Gene families : OG0000011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09614

Target Alias Description ECC score Gene Family Method Actions
Adi_g013801 ORF240B not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g014795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00878 ORF240B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49019 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03783.t1 Aspi01Gene03783 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene04427.t1 CRK8, Aspi01Gene04427 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene18273.t1 Aspi01Gene18273 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19629.t1 Aspi01Gene19629 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene33289.t1 Aspi01Gene33289 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene39418.t1 CRK8, Aspi01Gene39418 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene43708.t1 CRK8, Aspi01Gene43708 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene47821.t1 Aspi01Gene47821 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene52650.t1 ORF240B, Aspi01Gene52650 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene53718.t1 CRK8, Aspi01Gene53718 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56331.t1 ORF240B, Aspi01Gene56331 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g57956 CRK8 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g12266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24873 ORF240B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25649 ORF240B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10099 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_19936 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 OrthoFinder output from all 47 species
Gb_20056 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 OrthoFinder output from all 47 species
Gb_20738 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.17 OrthoFinder output from all 47 species
Gb_21087 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_22530 ORF240B Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_39390 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_40169 ORF240B Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Gb_41260 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_41805 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Mp4g00400.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Ore_g11073 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18822 ORF145A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 1 105
No external refs found!