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Gb_09427


Description : transcription factor (BBX-CO)


Gene families : OG0001549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09427

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00175490 evm_27.TU.AmTr_v1... Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00100930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Aob_g03550 COL9 BBX class-II transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28741.t1 Aspi01Gene28741 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003473001 COL9 Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011820001 COL9 No description available 0.04 OrthoFinder output from all 47 species
MA_10427343g0010 COL9 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Pir_g50108 No alias BBX class-II transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g024010.3.1 Solyc05g024010 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Solyc09g074560.3.1 Solyc09g074560 transcription factor (BBX-CO) 0.05 OrthoFinder output from all 47 species
Solyc12g006240.2.1 COL9, Solyc12g006240 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
Tin_g12507 No alias BBX class-II transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 512 554
No external refs found!