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  5. Gb_09385

Gb_09385


Description : assembly factor (eIF1) of eIF1


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09385

Target Alias Description ECC score Gene Family Method Actions
AT5G54940 No alias Translation initiation factor SUI1 family protein 0.03 OrthoFinder output from all 47 species
Adi_g002164 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47733 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G026700.1 Ceric.06G026700 assembly factor (eIF1) of eIF1 & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G021900.1 Ceric.13G021900 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g50053 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20659 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38056 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_4020V3.1 Pp3c6_4020 Translation initiation factor SUI1 family protein 0.02 OrthoFinder output from all 47 species
Solyc07g064620.2.1 Solyc07g064620 assembly factor (eIF1) of eIF1 0.02 OrthoFinder output from all 47 species
Zm00001e019581_P001 Zm00001e019581 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 77 151
No external refs found!