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  5. Gb_09110

Gb_09110


Description : microtubule-interacting component CC of cellulose synthase complex


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00252730 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00122220 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G45688 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.09 OrthoFinder output from all 47 species
AT2G41990 No alias CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant... 0.03 OrthoFinder output from all 47 species
AT3G08490 No alias BEST Arabidopsis thaliana protein match is: Late... 0.03 OrthoFinder output from all 47 species
AT3G24605 No alias No description available 0.03 OrthoFinder output from all 47 species
AT5G42860 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aev_g07747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g59330.1 LOC_Os04g59330 microtubule-interacting component CC of cellulose... 0.04 OrthoFinder output from all 47 species
Pnu_g08298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_7260V3.1 Pp3c16_7260 Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Ppi_g02766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018396 No alias not classified & original description: CDS=285-692 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020916 No alias not classified & original description: CDS=279-1298 0.04 OrthoFinder output from all 47 species
Sam_g08763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g087140.4.1 Solyc01g087140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g120710.2.1 Solyc03g120710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g11273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 189 291
No external refs found!