Gb_08958

Description : Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana (sp|q9fnl2|pp418_arath : 434.0)

Gene families : OG0001250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001250_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08958

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00259780	evm_27.TU.AmTr_v1...	Putative pentatricopeptide repeat-containing protein...	0.03	OrthoFinder output from all 47 species
AMTR_s00015p00258950	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At5g16420,...	0.03	OrthoFinder output from all 47 species
AT3G09060	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.03	OrthoFinder output from all 47 species
GSVIVT01011280001	No alias	Pentatricopeptide repeat-containing protein At5g46100...	0.03	OrthoFinder output from all 47 species
GSVIVT01024665001	No alias	Pentatricopeptide repeat-containing protein At3g09060...	0.04	OrthoFinder output from all 47 species
LOC_Os01g48140.1	LOC_Os01g48140	Pentatricopeptide repeat-containing protein At5g46100...	0.02	OrthoFinder output from all 47 species
Zm00001e027557_P001	Zm00001e027557	Pentatricopeptide repeat-containing protein At3g48810...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	187	220
IPR002885	Pentatricopeptide_repeat	54	81
IPR002885	Pentatricopeptide_repeat	228	275
IPR002885	Pentatricopeptide_repeat	122	169
IPR002885	Pentatricopeptide_repeat	296	345
IPR002885	Pentatricopeptide_repeat	380	422

External Links

No external refs found!