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Gb_08699 (RECQI1)


Aliases : RECQI1

Description : ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana (sp|q9ft74|rql1_arath : 560.0)


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08699
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0087.g042358 ATRECQ4A, ATSGS1, RECQ4A helicase component *(RecQ4A) of RTR Holliday junction... 0.07 OrthoFinder output from all 47 species
Ceric.17G060200.1 ATRECQ4A,... helicase component *(RecQ4A) of RTR Holliday junction... 0.06 OrthoFinder output from all 47 species
Ceric.34G005600.1 RECQI1, Ceric.34G005600 not classified & original description: pacid=50623064... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.26 RecQl3, ATRECQ3 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre03.g178950 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre04.g219750 ATRECQ4A, ATSGS1, RECQ4A Cell cycle.mitosis and meiosis.meiotic... 0.01 OrthoFinder output from all 47 species
GSVIVT01023325001 ATRECQ4A, ATSGS1, RECQ4A Cell cycle.mitosis and meiosis.meiotic... 0.08 OrthoFinder output from all 47 species
GSVIVT01031213001 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os04g35420.1 ATRECQ4A,... helicase component RecQ4A of RTR Holliday junction... 0.08 OrthoFinder output from all 47 species
LOC_Os11g44910.1 RECQI1, LOC_Os11g44910 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g14718 ATRECQ4A, ATSGS1, RECQ4A helicase component *(RecQ4A) of RTR Holliday junction... 0.04 OrthoFinder output from all 47 species
Len_g56734 RECQI1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
MA_10435954g0010 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
MA_10436537g0010 ATRECQ4A, ATSGS1, RECQ4A helicase component RecQ4A of RTR Holliday junction... 0.12 OrthoFinder output from all 47 species
MA_30494g0010 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_361558g0010 ATRECQ4A, ATSGS1, RECQ4A ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Mp4g14290.1 ATRECQ4A, ATSGS1, RECQ4A helicase component RecQ4A of RTR Holliday junction... 0.09 OrthoFinder output from all 47 species
Msp_g27927 RECQI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41299 RECQI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo98462 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc01g100280.4.1 RECQI1, Solyc01g100280 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Solyc01g103960.3.1 ATRECQ4A,... helicase component RecQ4A of RTR Holliday junction... 0.09 OrthoFinder output from all 47 species
Tin_g29220 ATRECQ4A, ATSGS1, RECQ4A helicase component *(RecQ4A) of RTR Holliday junction... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 344 451
IPR011545 DEAD/DEAH_box_helicase_dom 138 307
No external refs found!