Gb_08696 (U2AF35B, ATU2AF35B)

Aliases : U2AF35B, ATU2AF35B

Description : small subunit of U2AF pre-RNA splicing auxiliary factor complex

Gene families : OG0001523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001523_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08696

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00118880	U2AF35B,...	RNA processing.RNA splicing.U2-type-intron-specific...	0.05	OrthoFinder output from all 47 species
Ceric.39G048700.1	ATU2AF35A,...	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.07	OrthoFinder output from all 47 species
Dac_g00507	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species
Dcu_g10452	ATU2AF35A	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.02	OrthoFinder output from all 47 species
Pnu_g17580	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species
Solyc10g083640.2.1	U2AF35B,...	small subunit of U2AF pre-RNA splicing auxiliary factor complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	83	135
IPR000571	Znf_CCCH	14	37

External Links

No external refs found!