Gb_08357


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 125.0)


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08357

Target Alias Description ECC score Gene Family Method Actions
Aev_g09535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38229 ORF111A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27989.t1 Aspi01Gene27989 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32663.t1 Aspi01Gene32663 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33429.t1 ORF240B, Aspi01Gene33429 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40360.t1 Aspi01Gene40360 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62930.t1 CRK8, Aspi01Gene62930 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_40748g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g21767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_15570V3.1 Pp3c12_15570 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c13_3860V3.1 Pp3c13_3860 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c22_3860V3.1 Pp3c22_3860 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c23_2640V3.1 Pp3c23_2640 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c24_16280V3.1 Pp3c24_16280 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c3_36040V3.1 Pp3c3_36040 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c4_15120V3.1 Pp3c4_15120 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c4_5390V3.1 Pp3c4_5390 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c5_14290V3.1 Pp3c5_14290 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c6_1560V3.1 Pp3c6_1560 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c8_19680V3.1 Pp3c8_19680 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c9_1850V3.1 Pp3c9_1850 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Solyc10g047825.1.1 Solyc10g047825 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g061755.1.1 Solyc11g061755 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!