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  5. Gb_08118

Gb_08118 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana (sp|q9lfl5|pp390_arath : 597.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08118

Target Alias Description ECC score Gene Family Method Actions
Gb_01327 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_06115 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
Gb_09410 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_30097 CRR22 RNA editing factor (CRR21) 0.06 OrthoFinder output from all 47 species
Gb_30147 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.07 OrthoFinder output from all 47 species
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_10429540g0020 LOI1, MEF11 Pentatricopeptide repeat-containing protein At4g14850... 0.05 OrthoFinder output from all 47 species
MA_10430171g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_18277g0010 CRR22 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_392600g0010 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_470025g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_81105g0010 REME1 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
MA_8319g0010 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Smo105776 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
Smo70138 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo82024 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 286 333
IPR002885 Pentatricopeptide_repeat 163 209
IPR002885 Pentatricopeptide_repeat 487 535
IPR032867 DYW_dom 661 785
IPR002885 Pentatricopeptide_repeat 563 586
IPR002885 Pentatricopeptide_repeat 72 92
IPR002885 Pentatricopeptide_repeat 389 418
IPR002885 Pentatricopeptide_repeat 361 384
No external refs found!