Aliases : DOT4
Description : Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana (sp|q9lfl5|pp390_arath : 572.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G06140 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT1G17630 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G20540 | MEF21 | mitochondrial editing factor 21 | 0.03 | OrthoFinder output from all 47 species | |
AT2G41080 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G44880 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G13770 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G26540 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G14820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
Gb_03570 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_04446 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.06 | OrthoFinder output from all 47 species | |
Gb_11925 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_13100 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Gb_19299 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Gb_21054 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Gb_23085 | No alias | RNA editing factor (MEF19) | 0.06 | OrthoFinder output from all 47 species | |
Gb_25582 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
Gb_26155 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_26340 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.06 | OrthoFinder output from all 47 species | |
Gb_39725 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species | |
MA_101084g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10426261g0020 | CRR22 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_10429837g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10430355g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
MA_10432670g0020 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_107356g0010 | CRR2 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_112066g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_118886g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | OrthoFinder output from all 47 species | |
MA_13022g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.09 | OrthoFinder output from all 47 species | |
MA_131g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_16226g0010 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.04 | OrthoFinder output from all 47 species | |
MA_178429g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_193080g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
MA_305950g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_35442g0010 | No alias | RNA editing factor (SLO2) | 0.04 | OrthoFinder output from all 47 species | |
MA_519985g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_55967g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_56322g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
MA_59148g0010 | CRR22 | RNA editing factor (MEF11) | 0.04 | OrthoFinder output from all 47 species | |
MA_61422g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
MA_632994g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.04 | OrthoFinder output from all 47 species | |
MA_658463g0010 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_742g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
MA_97789g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e008183_P001 | Zm00001e008183 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030553_P001 | Zm00001e030553 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e031693_P001 | Zm00001e031693 | Pentatricopeptide repeat-containing protein At4g14050,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035764_P001 | Zm00001e035764 | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 560 | 608 |
IPR002885 | Pentatricopeptide_repeat | 121 | 169 |
IPR002885 | Pentatricopeptide_repeat | 223 | 270 |
IPR002885 | Pentatricopeptide_repeat | 358 | 406 |
IPR002885 | Pentatricopeptide_repeat | 460 | 507 |
IPR002885 | Pentatricopeptide_repeat | 704 | 730 |
IPR002885 | Pentatricopeptide_repeat | 298 | 320 |
IPR002885 | Pentatricopeptide_repeat | 98 | 120 |
IPR002885 | Pentatricopeptide_repeat | 326 | 352 |
No external refs found! |