Gb_08014

Description : DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana (sp|q9ffq1|rh31_arath : 268.0)

Gene families : OG0001618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08014

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00261910	evm_27.TU.AmTr_v1...	Probable DEAD-box ATP-dependent RNA helicase 48...	0.01	OrthoFinder output from all 47 species
AT1G63250	No alias	DEA(D/H)-box RNA helicase family protein	0.03	OrthoFinder output from all 47 species
Aspi01Gene05460.t1	Aspi01Gene05460	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene07602.t1	Aspi01Gene07602	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene07605.t1	Aspi01Gene07605	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g06438	No alias	mRNA helicase *(RH31) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os06g33520.1	LOC_Os06g33520	DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
Ore_g30280	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30282	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	59	132
IPR001650	Helicase_C	183	263

External Links

No external refs found!