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  5. Gb_08011

Gb_08011 (ORF170)


Aliases : ORF170

Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 115.0)


Gene families : OG0000012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08011

Target Alias Description ECC score Gene Family Method Actions
Gb_00282 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Gb_01474 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_02021 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.33 OrthoFinder output from all 47 species
Gb_04117 ORF240B Retrovirus-related Pol polyprotein from transposon RE1... 0.2 OrthoFinder output from all 47 species
Gb_04521 ORF170 Uncharacterized mitochondrial protein AtMg00820... 0.2 OrthoFinder output from all 47 species
Gb_05080 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_05496 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_06017 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_06309 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Gb_07720 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_07932 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_07945 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_08791 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_17625 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_19564 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 OrthoFinder output from all 47 species
Gb_25980 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_28273 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.07 OrthoFinder output from all 47 species
Gb_31472 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_31929 No alias Uncharacterized mitochondrial protein AtMg00820... 0.03 OrthoFinder output from all 47 species
Gb_32087 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Gb_33741 ORF170 Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 58 155
No external refs found!