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  5. Gb_07914

Gb_07914


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 796.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07914

Target Alias Description ECC score Gene Family Method Actions
Adi_g025632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34560 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61873 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g26948 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30469 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G008500.1 Ceric.24G008500 not classified & original description: pacid=50628459... 0.04 OrthoFinder output from all 47 species
Dcu_g08802 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_79624g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Msp_g11635 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15159 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12401 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g33539 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 251 280
IPR002885 Pentatricopeptide_repeat 645 674
IPR002885 Pentatricopeptide_repeat 220 248
IPR002885 Pentatricopeptide_repeat 347 374
IPR002885 Pentatricopeptide_repeat 127 157
IPR002885 Pentatricopeptide_repeat 282 311
IPR002885 Pentatricopeptide_repeat 96 123
IPR002885 Pentatricopeptide_repeat 375 403
IPR002885 Pentatricopeptide_repeat 313 341
IPR002885 Pentatricopeptide_repeat 186 219
IPR002885 Pentatricopeptide_repeat 505 551
IPR002885 Pentatricopeptide_repeat 404 451
IPR032867 DYW_dom 678 802
No external refs found!