1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_07877

Gb_07877 (LBD22)


Aliases : LBD22

Description : transcription factor (AS2/LOB)


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07877

Target Alias Description ECC score Gene Family Method Actions
AT1G72980 LBD7 LOB domain-containing protein 7 0.02 OrthoFinder output from all 47 species
AT3G13850 LBD22 LOB domain-containing protein 22 0.04 OrthoFinder output from all 47 species
Ehy_g13259 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016328001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016334001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
MA_108847g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g00307 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002692_P001 LBD18, Zm00001e002692 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e031682_P001 AS2, Zm00001e031682 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 148 245
No external refs found!