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  5. Gb_07755

Gb_07755 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 494.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07755
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT2G20540 MEF21 mitochondrial editing factor 21 0.03 OrthoFinder output from all 47 species
Gb_03570 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_04446 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.07 OrthoFinder output from all 47 species
Gb_11925 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_13100 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_19299 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_21054 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_21442 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
Gb_23085 No alias RNA editing factor (MEF19) 0.07 OrthoFinder output from all 47 species
Gb_25582 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 OrthoFinder output from all 47 species
Gb_26155 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.06 OrthoFinder output from all 47 species
Gb_26340 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.08 OrthoFinder output from all 47 species
Gb_39725 No alias Putative pentatricopeptide repeat-containing protein... 0.09 OrthoFinder output from all 47 species
MA_10429540g0020 LOI1, MEF11 Pentatricopeptide repeat-containing protein At4g14850... 0.08 OrthoFinder output from all 47 species
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_137736g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_18277g0010 CRR22 Pentatricopeptide repeat-containing protein At4g39530... 0.05 OrthoFinder output from all 47 species
MA_193080g0010 CRR22 Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 326 348
IPR002885 Pentatricopeptide_repeat 558 582
IPR002885 Pentatricopeptide_repeat 484 532
IPR002885 Pentatricopeptide_repeat 250 297
IPR002885 Pentatricopeptide_repeat 382 430
IPR002885 Pentatricopeptide_repeat 149 196
No external refs found!