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  5. Gb_07562

Gb_07562 (CLO-3, RD20)


Aliases : CLO-3, RD20

Description : caleosin


Gene families : OG0001041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07562
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AT1G70670 No alias Caleosin-related family protein 0.03 OrthoFinder output from all 47 species
AT1G70680 No alias Caleosin-related family protein 0.05 OrthoFinder output from all 47 species
AT2G33380 CLO-3, RD20 Caleosin-related family protein 0.05 OrthoFinder output from all 47 species
AT5G55240 ATPXG2 ARABIDOPSIS THALIANA PEROXYGENASE 2 0.02 OrthoFinder output from all 47 species
Aev_g20489 ATPXG2 Caleosin-type peroxygenase & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g11594 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52137 No alias Caleosin-type peroxygenase & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene30864.t1 CLO1, ATS1,... Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G094700.1 ATPXG2, Ceric.04G094700 Caleosin-type peroxygenase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.04G095000.1 CLO-3, RD20,... Caleosin-type peroxygenase & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g16123 No alias Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18062 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g20886 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39637 CLO-3, RD20 caleosin 0.04 OrthoFinder output from all 47 species
LOC_Os04g43200.1 CLO-3, RD20,... caleosin 0.02 OrthoFinder output from all 47 species
LOC_Os06g14350.1 LOC_Os06g14350 caleosin 0.03 OrthoFinder output from all 47 species
LOC_Os06g14370.1 LOC_Os06g14370 caleosin 0.03 OrthoFinder output from all 47 species
MA_10428346g0010 CLO-3, RD20 caleosin 0.04 OrthoFinder output from all 47 species
MA_410580g0010 CLO-3, RD20 caleosin 0.07 OrthoFinder output from all 47 species
MA_524071g0010 CLO-3, RD20 caleosin 0.07 OrthoFinder output from all 47 species
Msp_g08244 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08322 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16427 No alias Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41616 No alias Caleosin-type peroxygenase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45030 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26657 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_2090V3.1 CLO-3, RD20, Pp3c6_2090 Caleosin-related family protein 0.02 OrthoFinder output from all 47 species
Ppi_g06119 ATPXG2 Caleosin-type peroxygenase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27451 No alias Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005410.4.1 Solyc01g005410 caleosin 0.05 OrthoFinder output from all 47 species
Solyc04g005720.3.1 Solyc04g005720 caleosin 0.03 OrthoFinder output from all 47 species
Solyc04g007960.4.1 Solyc04g007960 caleosin 0.04 OrthoFinder output from all 47 species
Zm00001e000874_P001 CLO-3, RD20,... caleosin 0.02 OrthoFinder output from all 47 species
Zm00001e036026_P001 Zm00001e036026 caleosin 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007736 Caleosin-related 58 223
No external refs found!