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  5. Gb_07542

Gb_07542


Description : COP1-interactive protein 1 OS=Arabidopsis thaliana (sp|f4jzy1|cip1_arath : 167.0)


Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07542
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254550 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.04 OrthoFinder output from all 47 species
Als_g30311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os02g38480.1 LOC_Os02g38480 TNO1 vesicle trafficking tethering factor 0.03 OrthoFinder output from all 47 species
Len_g22993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10430492g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432450g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_167448g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4333439g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp4g21920.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022514 No alias not classified & original description: CDS=346-8904 0.02 OrthoFinder output from all 47 species
Zm00001e015026_P001 Zm00001e015026 TNO1 vesicle trafficking tethering factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!