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  5. Gb_07534

Gb_07534


Description : no hits & (original description: none)


Gene families : OG0000560 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000560_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07534
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AT5G19870 No alias Family of unknown function (DUF716) 0.05 OrthoFinder output from all 47 species
Ala_g16202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24396.t1 Aspi01Gene24396 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G015600.1 Ceric.01G015600 not classified & original description: pacid=50592776... 0.06 OrthoFinder output from all 47 species
Ceric.12G020800.1 Ceric.12G020800 not classified & original description: pacid=50602099... 0.05 OrthoFinder output from all 47 species
Ceric.27G028100.1 Ceric.27G028100 not classified & original description: pacid=50605886... 0.06 OrthoFinder output from all 47 species
Dac_g09824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_19284 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g27250.1 LOC_Os09g27250 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g27260.1 LOC_Os09g27260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429075g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10429075g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10430743g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_135096g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_6137859g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_7090862g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_73440g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8895597g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_95696g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_9590976g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g16247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004082 No alias not classified & original description: CDS=1-1002 0.04 OrthoFinder output from all 47 species
Sam_g17977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g050430.1.1 Solyc10g050430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030554_P001 Zm00001e030554 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e034291_P001 Zm00001e034291 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006904 DUF716 124 257
No external refs found!